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Unité Mixte de Recherche Inra-Univ. Bordeaux 1 "Biodiversité Gènes et Communautés" - Biogeco

Unité mixte de recherche (Inra, Univ. Bordeaux 1)Biodiversité, gènes et communautés (Biogeco) INRA_rvb150Bordeaux1

INRA Bordeaux-Aquitaine

Site de Recherches Forêt-Bois

69 route d'Arcachon

33612 CESTAS Cedex - FRANCE

2009

Publications 2009

Anthelme F, Michalet R (2009) Grass-to-tree facilitation in an arid grazed environment (Aïr Mountains, Sahara).Basic and Applied Ecology10, 437-446.

Archaux F, Camaret S, Dupouey J-L, Ulrich E, Corcket E, Bourjot L, Brethes A, Chevalier R, Dobremez J-F, Dumas Y, Dume G, Foret M, Forgeard F, Gallet M-L, Picard J-F, Richard F, Savoie J-M, Seytre L, Timbal J, Touffet J (2009) Can we reliably estimate species richness with large plots? an assessment through calibration training.Plant Ecology203, 303-315.

Ascher J, Ceccherini MT, Landi L, Mench M, Pietramellara G, Nannipieri P, Renella G (2009) Composition, biomass and activity of microflora, and leaf yields and foliar elemental concentrations of lettuce, after in situ stabilization of an arsenic-contaminated soil.Applied Soil Ecology41, 351-359.

Bacles CFE, Brooks J, Lee DJ, Schenk PM, Lowe AJ, Kremer A (2009) Reproductive biology of Corymbia citriodora subsp variegata and effective pollination across its native range in Queensland, Australia.Southern Forests71, 125-132.

Barbaro L, van Halder I (2009) Linking bird, carabid beetle and butterfly life-history traits to habitat fragmentation in mosaic landscapes.Ecography 32, 321-333.

Bertheau C, Salle A, Rossi J-P, Bankhead-dronnet S, Pineau X, Roux-Morabito G, Lieutier F (2009) Colonisation of native and exotic conifers by indigenous bark beetles (Coleoptera: Scolytinae) in France.Forest Ecology and Management258, 1619-1628.

Bonhomme L, Monclus R, Vincent D, Carpin S, Momenech AM, Plomion C, Brignolas F, Morabito D (2009) Leaf proteome analysis of eight Populus x euramericana genotypes: genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins.Proteomics9, 4121-4142.

Bonhomme L, Monclus R, Vincent D, Carpin S, Claverol S, Lomenech AM, Labas V, Plomion C, Brignolas F, Morabito, D (2009) Genetic variation and drought response in two Populus x euramericana genotypes through 2-DE proteomic analysis of leaves from field and glasshouse cultivated plants.Phytochemistry70, 988-1002.

Bouffier L, Raffin A, Rozenberg P, Meredieu C, Kremer A (2009) What are the consequences of growth selection on wood density in the French maritime pine breeding programme?Tree Genetics & Genomes5, 11-25.

Bresson CC, Kowalski AS, Kremer A, Delzon S (2009) Evidence of altitudinal increase in photosynthetic capacity: gas exchange measurements at ambient and constant CO2 partial pressures.Annals of Forest Science66.

Brin A, Brustel H, Jactel H (2009) Species variables or environmental variables as indicators of forest biodiversity: a case study using saproxylic beetles in Maritime pine plantations. Annals of Forest Science66, 306.

Brooker RW, Callaway RM, Cavieres L, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Valiente-Banuet A, Whitham TG (2009) Don't diss integration: A comment on Ricklefs' disintegrating communities.American Naturalist174, 919-927.

Burgarella C, Lorenzo Z, Jabbour-Zahab R, Lumaret R, Guichoux E, Petit RJ, Soto A, Gil L (2009) Detection of hybrids in nature: application to oaks (Quercus suber and Q. ilex).Heredity102, 442-452.

Cochard H, Hölttä T, Herbette S, Delzon S, Mencuccini M (2009) New insights into the mechanism of water-stress induced cavitation in conifers.Plant Physiology 151, 949-954.

Decaëns T, Jimenez JJ, Rossi J-P (2009) A null-model analysis of the spatio-temporal distribution of earthworm species assemblages in Colombian grasslands.Journal of Tropical Ecology25, 415-427.

Deconchat M, Brockerhoff E, Barbaro L (2009) Effects of surrounding landscape composition on the conservation value of native and exotic habitats for native forest birds.Forest Ecology and Management258(Supplement), S196-S204.

Devaux M, Ghashghaie J, Bert D, Lambrot C, Gessler A, Bathellier C, Ogee J, Loustau D (2009) Carbon stable isotope ratio of phloem sugars in mature pine trees throughout the growing season: comparison of two extraction methods.Rapid Communications in Mass Spectrometry23, 2511-2518.

Di Vecchi-Staraz M, Laucou V, Bruno G, Lacombe T, Gerber S, Bourse T, Boselli M, This P (2009) Low level of pollen-mediated gene flow from cultivated to wild grapevine: Consequences for the evolution of the endangered subspecies Vitis vinifera L. subsp silvestris.Journal of Heredity100, 66-75.

Du F K, Petit RJ, Liu JQ (2009) More introgression with less gene flow: chloroplast vs. mitochondrial DNA in the Picea asperata complex in China, and comparison with other Conifers.Molecular Ecology18, 1396-1407.

Duminil J, Hardy OJ, Petit RJ (2009) Plant traits correlated with generation time directly affect inbreeding depression and mating system and indirectly genetic structure.BMC Evolutionary Biology9, 77.

Dutoit T, Thinon M, Talon B, Buisson E, Alard D (2009) Sampling soil wood charcoals at a high spatial resolution: a new methodology to investigate the origin of grassland plant communities.Journal of Vegetation Science20, 349-358.

Excoffier L, Foll M, Petit RJ (2009) Genetic consequences of range expansions.Annual Review of Ecology, Evolution and Systematics40, 481-501.

Forey E, Lortie CJ, Michalet R (2009) Spatial patterns of association at local and regional scales in coastal sand dune communities.Journal of Vegetation Science20, 916–925.

Foucart C, Jauneau A, Gion J-M, Amelot N, Martinez Y, Panegos P, Grima-Pettenati J, Sivadon P (2009) Overexpression of EgROP1, a Eucalyptus vascular-expressed Rac-like small GTPase, affects secondary xylem formation in Arabidopsis thaliana.New Phytologist183, 1014-1029.

Gérardeaux E, Saur E, Constantin J, Porté A, Jordan-Meille L (2009) Effect of carbon assimilation on dry weight production and partitioning during vegetative growth of K-deficient cotton (Gossypium hirsutum L.) plants.Plant and Soil324, 329–343.

Grattapaglia D, Plomion C, Kirst M, Sederoff RR (2009) Genomics of growth traits in forest trees.Current Opinion in Plant Biology12, 148-156.

Horn A, Stauffer C, Lieutier F, Kerdelhué C (2009) Complex postglacial history of the temperate bark beetle Tomicus piniperda L. (Coleoptera, Scolytinae).Heredity103, 238-247.

Hu FS, Hampe A, Petit RJ (2009) Paleoecology meets genetics: Deciphering past vegetational dynamics.Frontiers in Ecology & Environment7, 371-379.

Jactel H, Nicoll B, Branco M, Gonzalez-Olabarria JR, Grodzki W, Langström B, Moreira F, Netherer S, Orazio C, Piou D, Santos H, Schelhaas MJ, Tojic K, Vodde F (2009) The influences of forst stand management on biotic and abiotic risks of damage.Annals of Forest Science66, 701.

Kerdelhué C, Zane L, Simonato M, Salvato P, Rousselet J, Roques A, Battisti A (2009) Quaternary history and contemporary patterns in a currently expanding species.BMC Evolutionary Biology9, 220.

LeBoldus JM, Blenis PV, Thomas BR, Feau N, Bernier L (2009) Susceptibility of Populus balsamifera to Septoria musiva: A field study and greenhouse experiment.Plant Disease93, 1146-1150.

Lepais O, Petit RJ, Guichoux E, Lavabre JE, Alberto F, Kremer A, Gerber S (2009) Species relative abundance and direction of introgression in oaks.Molecular Ecology18, 2228-2242.

Liancourt P, Viard-Crétat F, Michalet R (2009) Contrasting community responses to fertilization and the role of the competitive ability of dominant species.Journal of Vegetation Science20, 138-147.

Lorenzo Z, Burgarella C, López de Heredia U, Lumaret R, Petit RJ, Soto Á, Gil L (2009) Relevance of genetics for conservation policies: The case of the 67 remaining Minorcan cork oaks.Annals of Botany 104, 1069-1076.

Marçais B, Kavkova M and Desprez-Loustau M-L (2009) Phenotypic variation in phenology of ascospore production between European populations of oak powdery mildew.Annals of Forest Science66, 814.

Martín-García J, Diez JJ, Jactel H (2009) Towards standardised crown condition assessment in poplar plantations.Annals of Forest Science66, 308.

Mathieu J, Grimaldi M, Jouquet P, Rouland C, Lavelle P, Desjardins T, Rossi J-P (2009) Spatial patterns of grasses influence soil macrofauna biodiversity in Amazonian pastures.Soil Biology & Biochemistry41, 586-593.

Mench M, Bes C (2009) Assessment of ecotoxicity of topsoils from a wood treatment site.Pedosphere19, 143-155.

Mench M, Schwitzguébel J-P, Schroeder P, Bert V, Gawronski S, Gupta S (2009) Assessment of successful experiments and limitations of phytotechnologies: contaminant uptake, detoxification and sequestration, and consequences for food safety.Environmental Science and Pollution Research16, 876-900.

Ogée J, Barbour MM, Wingate L, Bert D, Bosc A, Stievenard M, Lambrot C, Pierre M, Bariac T, Loustau D, Dewar RC (2009) A single-substrate model to interpret intra-annual stable isotope signals in tree-ring cellulose.Plant Cell and Environment32, 1071-1090.

Onwubuya K, Cundy A, Puschenreiter M, Kumpiene J, Bone B, Greaves J, Teasdale P, Mench M, Tlustos P, Mikhalovsky S, Waite S, Friesl-Hanl W, Marschner B, Müller I (2009) Developing decision support tools for the selection of "gentle" remediation approaches.Science of The Total Environment407, 6132-6142.

Pakeman RJ, Pugnaire FI, Michalet R, Lortie CJ, Schiffers K, Maestre F, Travis J (2009) Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions.Biology Letters5, 577-579.

Papura D, Giresse X, Chauvin B, Caron H, Delmotte F, van Helden M (2009) Isolation and characterization of polymorphic microsatellite loci in the green leafhopper Empoasca vitis Goethe (Homoptera).Molecular Ecology Resources9, 827-829.

Petit RJ, Excoffier L (2009) Gene flow and species delimitation.Trends in Ecology & Evolution24, 386-393.

Porté AJ, Samalens J-C, Dulhoste R, Teissier Du Cros R, Bosc A, Meredieu C (2009) Using cover measurements to estimate aboveground understorey biomass in Maritime pine stands.Annals of Forest Science66, 307.

Reubens B, Pannemans B, Danjon F, De Proft M, De Baets S, De Baerdemaeker J, Poesen J, Muys B (2009) The effect of mechanical stimulation on root and shoot development of young containerised Quercus robur and Robinia pseudoacacia trees.Trees23, 1213–1228.

Robin C, Martin M, Capdevielle X, Traver C, Colinas C (2009) Cryphonectria parasitica vegetative compatibility type analysis of populations in south-western France and northern Spain.Plant Pathology58, 527–535.

Rossi J-P, Franc A, Rousseau GX (2009) Indicating soil quality and the GISQ.Soil Biology & Biochemistry41, 444-445.

Rossi J-P, Samalens J-C, Guyon D, van Halder I, Jactel H, Menassieu P, Piou D (2009) Multiscale spatial variation of the bark beetle Ips sexdentatus damage in a pine plantation forest (Landes de Gascogne, Southwestern France).Forest Ecology and Management257, 1551-1557.

Roussel M, Dreyer E, Montpied P, Le-Provost G, Guehl J-M, Brendel O (2009) The diversity of C-13 isotope discrimination in a Quercus robur full-sib family is associated with differences in intrinsic water use efficiency, transpiration efficiency, and stomatal conductance.Journal of Experimental Botany60, 2419-2431.

Saccone P, Delzon S, Pagès JP, Brun JJ, Michalet R (2009) The role of biotic interactions in altering tree seedling responses to an extreme climatic event.Journal of Vegetation Science20, 403-414.

Ueno S, Taguchi Y, Tomaru N, Tsumura Y (2009) Development of EST-SSR markers from an inner bark cDNA library of Fagus crenata (Fagaceae).Conservation Genetics10, 1477-1485.

Vallet P, Meredieu C, Seynave I, Bélouard T, Dhôte J-F (2009) Species substitution for carbon storage: Sessile oak versus Corsican pine in France as a case study.Forest Ecology and Management257, 1314-1323.

Vangronsveld J, Herzig R, Weyens N, Boulet J, Adriaensen K, Ruttens A, Thewys T, Vassilev A, Meers E, Nehnevajova E, Lelie D, Mench M (2009) Phytoremediation of contaminated soils and groundwater: lessons from the field.Environmental Science and Pollution Research16, 765-794.

Vincent D, Balesdent M-H, Gibon J, Claverol S, Lapaillerie D, Lomenech A-M, Blaise F, Rouxel T, Martin F, Bonneu M, Amselem J, Dominguez V, Howlett BJ, Wincker P, Lebrun M-H, Plomion C (2009) Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE.Electrophoresis30, 4118–4136.

Viscosi V, Lepais O, Gerber S, Fortini P (2009) Leaf morphological analyses in four European oak species (Quercus) and their hybrids: A comparison of traditional and geometric morphometric methods. Plant Biosystems143, 564-574.

Vitasse Y, Delzon S, Bresson CC, Michalet R, Kremer A (2009) Altitudinal differentiation among populations of temperate tree species growing in a common garden: early survival, growth and leaf phenology.Canadian Journal of Forest Research39, 1289-1269.

Vitasse Y, Delzon S, Dufrêne E, Pontailler J-Y, Louvet J-M, Kremer, A, Michalet R (2009) Leaf phenology sensitivity to temperature in European trees: Do within-species populations exhibit similar responses?Agricultural and Forest Meteorology149, 735-744.

Vitasse Y, Porté AJ, Kremer A, Michalet R, Delzon S (2009) Responses of canopy duration to temperature changes in four temperate tree species: relative contributions of spring and autumn leaf phenology.Oecologia161, 187-198.

Xiao S, Michalet R, Wang G, Chen SY (2009) The interplay between positive and negative interactions shapes the “community biomass-species richness” relationship.Oikos118, 1343-1348.