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Unité Mixte de Recherche Inra-Univ. Bordeaux "Biodiversité Gènes et Communautés" - Biogeco

Unité mixte de recherche (Inra, Univ. Bordeaux 1) Biodiversité, gènes et communautés (Biogeco)


INRA Bordeaux-Aquitaine
Site de Recherches Forêt-Bois
69 route d'Arcachon
33612 CESTAS Cedex - FRANCE

Publications WoS 2017

Benito-Garzón M, Fady B, Davi H, Vizcaíno-Palomar N, Fernández-Manjarrés J (2018) Trees on the move: using decision theory to compensate for climate change at the regional scale in forest social-ecological systems. Regional Environmental Change: 1-11.

Gleiser G, Chybicki IJ, González‐Martínez SC, Aizen MA (2018) Phenological match drives pollen‐mediated gene flow in a temporally dimorphic tree. Plant Biology20: 93-100.

Grossman JJ, Vanhellemont M, Barsoum N, Bauhus J, Bruelheide H, Castagneyrol B, Cavender-Bares J, Eisenhauerf N, …, Jactel H, …, Verheyen K  (2018) Synthesis and future research directions linking tree diversity to growth, survival, and damage in a global network of tree diversity experiments. Environmental and Experimental Botany.

Leblois R, Gautier M, Rohfritsch A, Foucaud J, Burban C, et al. (2017) Deciphering the demographic history of allochronic differentiation in the pine processionary moth Thaumetopoea pityocampa. Molecular ecology.

Michalecka M, Masny S, Leroy T, Puławska J (2018) Population structure of Venturia inaequalis, a causal agent of apple scab, in response to heterogeneous apple tree cultivation. BMC Evolutionary Biology18: 5.

Moracho E, Jordano P, Hampe A (2017) Drivers of tree fecundity in pedunculate oak (Quercus robur) refugial populations at the species’ southwestern range margin. Plant Biology.

Ouayjan A, Hampe A (2018) Extensive sib-mating in a refugial population of beech (Fagus sylvatica) growing along a lowland river. Forest Ecology and Management407: 66-74.

Ahmad HB, Lens F, Capdeville G, Burlett R, Lamarque LJ, Delzon S (2017) Intraspecific variation in embolism resistance and stem anatomy across four sunflower (Helianthus annuus L.) accessions. Physiologia Plantarum.

Andrieu E, Cabanettes A, Alignier A, Van Halder I, Alard D, Archaux F, Barbaro L, Bouget C, Bailey S, Corcket E (2017) Edge contrast does not modulate edge effect on plants and pollinators. Basic and Applied Ecology.

Asad M, Menana Z, Ziegler-Devin I, Bert V, Chalot M, Herzig R, Mench M & Brosse N (2017) Pretreatment of trace element-enriched biomasses grown on phytomanaged soils for bioethanol production. Industrial Crops and Products107, 63-72.

Bauhus J, Forrester DI, Gardiner B, Jactel H, Vallejo R & Pretzsch H (2017) Ecological Forests Stability of Mixed-Species 7. Mixed-Species Forests: Ecology and Management, 337 p.

Becheler R, Masson JP, Arnaud‐Haond S, Halkett F, Mariette S, Guillemin ML, Valero M, Destombe C, Stoeckel S (2017) ClonEstiMate, a Bayesian method for quantifying rates of clonality of populations genotyped at two‐time steps. Molecular Ecology Resources.

Blanc-Jolivet C, Kersten B, Bourland N, Guichoux E, Delcamp A, Doucet J-L, Degen B (2017) Development of nuclear SNP markers for the timber tracking of the African tree species Sapelli, Entandrophragma cylindricum. Conservation Genetics Resources.

Blanc-Jolivet C, Kersten B, Daïnou K, Hardy O, Guichoux E, Delcamp A, Degen B (2017) Development of nuclear SNP markers for genetic tracking of Iroko, Milicia excelsa and Milicia regia. Conservation GeneticsResources.

Bohan DA, Vacher C, Tamaddoni-Nezhad A, Raybould A, Dumbrell AJ, Woodward G (2017) Next-generation global biomonitoring: Large-scale, automated reconstruction of ecological networks. Trends in Ecology & Evolution.

Bonal D, Pau M, Toigo M, Granier A, Perot T (2017) Mixing oak and pine trees does not improve the functional response to severe drought in central French forests. Annals of Forest Science74:72.

Boulanger V, Dupouey JL, Archaux F, Badeau V, Baltzinger C, Chevalier R, Corcket E, Dumas Y, Forgeard F, Mårell A (2017) Ungulates increase forest plant species richness to the benefit of non‐forest specialists. Global Change Biology.

Boutin M, Corcket E, Alard D, Villar L, Jiménez JJ, Blaix C, Lemaire C, Corriol G, Lamaze T, Pornon A (2017) Nitrogen deposition and climate change has increased vascular plant species richness and altered the composition of grazed subalpine grasslands. Journal of Ecology.

Bretagnolle A, Franc A (2017) Emergence of an integrated city-system in France (XVIIth–XIXth centuries): Evidence from toolset in graph theory. Historical Methods50, 49-65

Brockerhoff EG, Barbaro L, Castagneyrol B, Forrester DI, Gardiner B, González-Olabarria JR, Lyver POB, Meurisse N, Oxbrough A, Taki H (2017) Forest biodiversity, ecosystem functioning and the provision of ecosystem services. Biodiversity and Conservation26:3005-3035.

Brodribb TJ, Carriqui M, Delzon S, Lucani C (2017) Optical measurement of stem xylem vulnerability. Plant Physiology pp. 00552.02017.

Budde KB, González-Martínez SC, Navascués M, Burgarella C, Mosca E, Lorenzo Z, Zabal-Aguirre M, Vendramin GG, Verdú M, Pausas JG (2017) Increased fire frequency promotes stronger spatial genetic structure and natural selection at regional and local scales in Pinus halepensis Mill.Annals of Botany.

Caignard T, Kremer A, Firmat C, Nicolas M, Venner S, Delzon S (2017) Increasing spring temperatures favor oak seed production in temperate areas. Scientific Reports 7.

Carrier S, Castagneyrol B, Beylacq L, Nouette-Gaulain K, Montaudon M, Laurentjoye M (2017) Anatomical landmarks for maxillary nerve block in the pterygopalatine fossa: A radiological study. Journal of Stomatology oral and Maxillofacial Surgery.

Castagneyrol B, Bonal D, Damien M, Jactel H, Meredieu C, Muiruri EW, Barbaro L (2017) Bottom‐up and top‐down effects of tree species diversity on leaf insect herbivory. Ecology and Evolution.

Charrier G, Burlett R, Gambetta G, Delzon S, Domec J-C, Beaujard F (2016) Monitoring xylem hydraulic pressure in woody plants. Bio-protocol 7(20): e2580.

Charrier G, Chuine I, Bonhomme M, Améglio T (2017) Assessing frost damages using dynamic models in walnut trees: exposure rather than vulnerability controls frost risks. Plant, Cell & Environment.

Charrier G, Nolf M, Leitinger G, Charra-Vaskou K, Losso A, Tappeiner U, Améglio T, Mayr S (2017) Monitoring of freezing dynamics in trees: a simple phase shift causes complexity. Plant Physiology pp. 01815.02016.

Cochard H, Delzon S, Badel E (2017) X‐ray microtomography (micro‐CT): a reference technology for high‐resolution quantification of xylem embolism in trees. Plant, Cell & Environment 38:157-171.

Curt T, Frejaville T (2017) Wildfire policy in Mediterranean France: how far is it efficient and sustainable?Risk analysis.

der Plas F, Ratcliffe S, Ruiz‐Benito P, Scherer‐Lorenzen M, Verheyen K, Wirth C, Zavala MA, Ampoorter E, Baeten L, Barbaro L, ..., Castagneyrol B, Charbonnier Y,...,  (2017) Continental mapping of forest ecosystem functions reveals a high but unrealised potential for forest multifunctionality. Ecology letters.

Desjardins D, Brereton NJ, Marchand L, Brisson J, Pitre F, Labrecque M (2017) Complementarity of three distinctive phytoremediation crops for multiple-trace element contaminated soil. The Science of the total environment610:1428.

Desprez-Loustau M-l, Massot M, Feau N, Fort T, de Vicente A, Tores JA, Fernandez-Ortuno D (2017) Further support of conspecificity of oak and mango powdery mildews and first report of Erysiphe quercicola and Erysiphe alphitoides on mango in Mainland Europe. Plant Disease.

Dickie IA, Bufford JL, Cobb RC, Desprez-Loustau M-L, Grelet G, Hulme PE, Klironomos J, Makiola A, Nuñez MA, Pringle A, Thrall PH, Tourtellot SG, Waller L, Williams NM (2017) The emerging science of linked plant–fungal invasions. New Phytologist.

Du FK, Hou M, Wang W, Mao K, Hampe A (2017) Phylogeography of Quercus aquifolioides provides novel insights into the Neogene history of a major global hotspot of plant diversity in south‐west China. Journal of Biogeography44, 294–307.

Feliner GN, Álvarez I, Fuertes-Aguilar J, Heuertz M, Marques I, Moharrek F, Piñeiro R, Riina R, Rosselló J, Soltis P (2017) Is homoploid hybrid speciation that rare? An empiricist’s view. Heredity.

Fernandez-Conradi P, Borowiec N, Capdevielle X, Castagneyrol B, Maltoni A, Robin C, Selvi F, Van Halder I, Vétillard F, Jactel H (2017) Plant neighbour identity and invasive pathogen infection affect associational resistance to an invasive gall wasp. Biological Invasions.

Fernandez‐Conradi P, Jactel H, Hampe A, Leiva MJ, Castagneyrol B (2017) The effect of tree genetic diversity on insect herbivory varies with insect abundance. Ecosphere8.

Fernandez‐Conradi P, Jactel H, Robin C, Tack AJ, Castagneyrol B (2017) Fungi reduce preference and performance of insect herbivores on challenged plants. Ecology.

Firmat C, Delzon S, Louvet JM, Parmentier J, Kremer A (2017) Evolutionary dynamics of the leaf phenological cycle in an oak metapopulation along an elevation gradient. Journal of Evolutionary Biology.

Forrest A, Escudero M, Heuertz M, Wilson Y, Cano E, Vargas P (2017) Testing the hypothesis of low genetic diversity and population structure in narrow endemic species: the endangered Antirrhinum charidemi (Plantaginaceae). Botanical Journal of the Linnean Society183:260-270.

Fréjaville T, Curt T (2017) Seasonal changes in the human alteration of fire regimes beyond the climate forcing.Environmental Research Letters12:035006.

Garrouj M, Marchand L, Frayssinet M, Mench M, Castagneyrol B (2017) Trace element transfer from two contaminated soil series to Medicago sativa and one of its herbivores,Spodoptera exigua. International journal of phytoremediation.

Gauzere J, Delzon S, Davi H, Bonhomme M, de Cortazar-Atauri IG & Chuine I (2017) Integrating interactive effects of chilling and photoperiod in phenological process-based models. A case study with two European tree species: Fagus sylvatica and Quercus petraea. Agricultural and Forest Meteorology244, 9-20.

Gerzabek G, Oddou‐Muratorio S, Hampe A (2017) Temporal change and determinants of maternal reproductive success in an expanding oak forest stand. Journal of Ecology105, 39-48.

Giffard B, David G, Joubard B, Piou D, Jactel H (2017) How do sex and sexual maturation influence the response of Monochamus galloprovincialis to host odours?Journal of Applied Entomology.

Gimeno TE, Ogée J, Royles J, Gibon Y, West JB, Burlett R, Jones SP, Sauze J, Wohl S, Benard C (2017) Bryophyte gas‐exchange dynamics along varying hydration status reveal a significant carbonyl sulphide (COS) sink in the dark and COS source in the light. New Phytologist

Grivet D, Avia K, Vaattovaara A, Eckert AJ, Neale DB, Savolainen O, González‐Martínez SC (2017) High rate of adaptive evolution in two widespread European pines. Molecular Ecology.

Holliday J, Aitken S, Cooke J, Fady B, González-Martínez S, Heuertz M, Jaramillo-Correa J, Lexer C, Staton M, Whetten R, Plomion C (2017) Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding. Molecular Ecology 10.1111/mec.13963

Jactel H, Bauhus J, Boberg J, Bonal D, Castagneyrol B, Gardiner B, Gonzalez-Olabarria JR, Koricheva J, Meurisse N, Brockerhoff EG (2017) Tree diversity drives forest stand resistance to natural disturbances.Current Forestry Reports 1-21.

Klein EK, Lagache‐Navarro L, Petit RJ (2017) Demographic and spatial determinants of hybridization rate. Journal of Ecology105,29-38.

Kramer K, Ducousso A, Gömöry D, Hansen JK, Ionita L, Liesebach M, Lorenţ A, Schüler S, Sulkowska M, de Vries S, von Wühlisch G (2017) Chilling and forcing requirements for foliage bud burst of European beech (Fagus sylvatica L.) differ between provenances and are phenotypically plastic. Agricultural and Forest Meteorology234:172-181.

Kumpiene J, Giagnoni L, Marschner B, Denys S, Mench M, Adriaensen K, Vangronsveld J, Puschenreiter M & Renella G (2017) Assessment of methods for determining bioavailability of trace elements in soils: A review. Pedosphere27, 389-406.

Labbé F, Fontaine M, Robin C, Dutech C (2017) Genetic signatures of variation in population size in a native fungal pathogen after the recent massive plantation of its host tree. Heredity.

Labbé F, Lung-Escarmant B, Fievet V, Soularue J-P, Laurent C, Robin C, Dutech C (2017) Variation in traits associated with parasitism and saprotrophism in a fungal root-rot pathogen invading intensive pine plantations. Fungal Ecology 26, 99-108.

Larter M, Pfautsch S, Domec JC, Trueba S, Nagalingum N, Delzon S (2017) Aridity drove the evolution of extreme embolism resistance and the radiation of conifer genus Callitris. New Phytologist.

Ley A, Heuertz M, Hardy OJ (2017) The evolutionary history of central African rain forest plants: phylogeographical insights from sister species in the climber genus Haumania (Marantaceae). Journal of Biogeography 44, 308–321.

Leroy T, Roux C, Villate L, Bodénès C, Romiguier J, Paiva JAP, Dossat C, Aury J-M, Plomion C, Kremer A (2017) Extensive recent secondary contacts between four European white oak species New Phytologist.

Mancilla-Leytón J, Cambrollé J, Valdés-Correcher E (2017) Grazing exclosure increases fruit and seed production but reduces seed viability in Myrtus communis. New Forests 1-10.

Marchand L, Brunel-Muguet S, Lamy I, Mench M, Pelosi C (2017) Modulation of trace element bioavailability for two earthworm species after biochar amendment into a contaminated technosol. Ecotoxicology.

Martin‐StPaul N, Delzon S, Cochard H (2017) Plant resistance to drought depends on timely stomatal closure. Ecology Letters.

Médoc V, Firmat C, Sheath DJ, Pegg J, Andreou D, Britton JR (2017) Parasites and biological invasions: Predicting ecological alterations at levels from individual hosts to whole networks. Advances in Ecological Research

Merceron NR, Leroy T, Chancerel E, Romero-Severson J, Borkowski D, Ducousso A, Monty A, Porté AJ, Kremer A (2017) Back to America: tracking the origin of European introduced populations of Quercus rubra L.Genome.

Olano JM, González-Muñoz N, Arzac A, Rozas V, von Arx G, Delzon S, García-Cervigón AI (2017) Sex determines xylem anatomy in a dioecious conifer: hydraulic consequences in a drier world. Tree Physiology 1-10.

Oustrière N, Marchand L, Rosette G, Friesl-Hanl W, Mench M (2017) Wood-derived-biochar combined with compost or iron grit for in situ stabilization of Cd, Pb, and Zn in a contaminated soil. Environmental Science and Pollution Research 1-14.

Oustrière N, Marchand L, Roulet E, Mench M (2017) Rhizofiltration of a Bordeaux mixture effluent in pilot-scale constructed wetland using Arundo donax L. coupled with potential Cu-ecocatalyst production. Ecological Engineering, 105, 296-305.

Pérez‐Izquierdo L, Zabal‐Aguirre M, Flores‐Rentería D, González‐Martínez S, Buée M, Rincón A (2017) Functional outcomes of fungal community shifts driven by tree genotype and spatial‐temporal factors in Mediterranean pine forests. Environmental Microbiology.

Pineau X, Bourguignon M, Jactel H, Lieutier F, & Sallé A (2017) Pyrrhic victory for bark beetles: Successful standing tree colonization triggers strong intraspecific competition for offspring ofIps sexdentatus. Forest Ecology and Management399, 188-196.

Quintela-Sabarís C, Marchand L, Smith JAC, Kidd PS (2017) Using AFLP genome scanning to explore serpentine adaptation and nickel hyperaccumulation in Alyssum serpyllifolium. Plant and Soil 1-18.

Quintela-Sabarís C, Marchand L, Kidd PS, Friesl-Hanl W, Puschenreiter M, Kumpiene J, Müller I, Neu S, Janssen J, Vangronsveld J (2017) Assessing phytotoxicity of trace element-contaminated soils phytomanaged with gentle remediation options at ten European field trials.Science of The Total Environment599:1388-1398.

Ratcliffe S, Wirth C, Jucker T, der Plas F, Scherer‐Lorenzen M, Verheyen K, Allan E, Benavides R, Bruelheide H, Ohse B, ..., Castagneyrol B, ..., Guyot V, ..., Jactel H, ..., Baeten L (2017) Biodiversity and ecosystem functioning relations in European forests depend on environmental context. Ecology Letters.

Reyer CP, Bathgate S, Blennow K, Borges JG, Bugmann H, Delzon S, Faias SP, Garcia-Gonzalo J, Gardiner B, Gonzalez-Olabarria JR, ... , Hanewinkel M  (2017) Are forest disturbances amplifying or canceling out climate change-induced productivity changes in European forests?Environmental ResearchLetters12:034027.

Ribeiro PC, Souza ML, Muller LA, Ellis VA, Heuertz M, Lemos‐Filho JP, Lovato MB (2016) Climatic drivers of leaf traits and genetic divergence in the tree Annona crassiflora: a broad spatial survey in the Brazilian savannas. Global change biology22:3789-3803.

Robin C, Andanson A, Saint‐Jean G, Fabreguettes O, Dutech C (2017) What was old is new again: thermal adaptation within clonal lineages during range expansion in a fungal pathogen. Molecular Ecology.

Sáenz-Romero C, Larter M, González-Muñoz N, Wehenkel C, Blanco-Garcia A, Castellanos-Acuña D, Burlett R, Delzon S (2017) Mexican conifers differ in their capacity to face climate change. Journal of Plant Hydraulics4:003.

Salmier A, Tirera S, de Thoisy B, Franc A, Darcissac E, Donato D, Bouchier C, Lacoste V, Lavergne A (2017) Virome analysis of two sympatric bat species (Desmodus rotundus and Molossus molossus) in French Guiana. PloS one12:e0186943.

Sofer L, Cabanillas DG, Gayral M, Téplier R, Pouzoulet J, Ducousso M, Dufin L, Bréhélin C, Ziegler-Graff V, Brault V, Revers F (2017) Identification of host factors potentially involved in RTM-mediated resistance during potyvirus long distance movement.Archives of Virology.

Song J, Brendel O, Bodénès C, Plomion C, Kremer A, Colin F (2017) X-ray computed tomography to decipher the genetic architecture of tree branching traits: oak as a case study. Tree Genetics & Genomes 13:5.

Soularue J-P, Robin C, Desprez-Loustau M-L, Dutech C (2017) Short rotations in forest plantations accelerate virulence evolution in root-rot pathogenic fungi. Forests8:205.

Stojnić S, Suchocka M, Benito-Garzón M, Torres-Ruiz J, Cochard H, Bolte A, Cocozza C, Cvjetković B, de Luis M, Martinez-Vilalta J,..., Delzon S (2017) Variation in xylem vulnerability to embolism in European beech from geographically marginal populations. Tree physiology 1-13.

Toïgo M, Barraquand F, Barnagaud J-Y, Piou D, Jactel H (2017) Geographical variation in climatic drivers of the pine processionary moth population dynamics. Forest Ecology and Management 404:141-155.

Toïgo M, Pérot T, Courbaud B, Castagneyrol B, Gégout JC, Longuetaud F, Jactel H, Vallet P (2017) Difference in shade tolerance drives the mixture effect on oak productivity. Journal of Ecology.

Tomaskova I, Bazant V, Bleha R, Vitamvas J, Delzon S, Stastny K, Vackar J (2017) Birds girdling activity on exotic tree species as a form of adaptive behavior?Contemporary Problems of Ecology 10:193-202.

Touceda-González M, Álvarez-López V, Prieto-Fernández Á, Rodríguez-Garrido B, Trasar-Cepeda C, Mench M, Puschenreiter M, Quintela-Sabarís C, Macías-García F, Kidd P (2017) Aided phytostabilisation reduces metal toxicity, improves soil fertility and enhances microbial activity in Cu-rich mine tailings. Journal of Environmental Management186, 301-313.

Touceda-González M, Prieto-Fernández Á, Renella G, Giagnoni L, Sessitsch A, Brader G, Kumpiene J, Dimitriou I, Eriksson J, Friesl-Hanl W, ..., Mench M, ... (2017) Microbial community structure and activity in trace element-contaminated soils phytomanaged by Gentle Remediation Options (GRO). Environmental Pollution231:237-251.

Torres‐Ruiz JM, Cochard H, Choat B, Jansen S, López R, Tomášková I, Padilla‐Díaz CM, Badel E, Burlett R, King A (2017) Xylem resistance to embolism: presenting a simple diagnostic test for the open vessel artefact. New Phytologist 215:489-499.

Torres-Ruiz JM, Cochard H, Fonseca E, Badel E, Gazarini L, Vaz M (2017) Differences in functional and xylem anatomical features allow Cistus species to co-occur and cope differently with drought in the Mediterranean region. Tree Physiology.

Truffaut L, Chancerel E, Ducousso A, Dupouey J-L, Badeau V, Ehrenmann F, Kremer A (2017) Fine‐scale species distribution changes in a mixed oak stand over two successive generations. New Phytologist

Tsykun T, Rellstab C, Dutech C, Sipos G, Prospero S (2017) Comparative assessment of SSR and SNP markers for inferring the population genetic structure of the common fungus Armillaria cepistipes. Heredity119:371.

Venner S, Siberchicot A, Pélisson PF, Bel-Venner MC, Nicolas M, Débias F, Miele V, Sauzet S, Boulanger V, Delzon S (2016) Trading-off seed number versus seed size may promote masting within plant population. American Naturalist

Vidal M, Plomion C, Raffin A, Harvengt L, Bouffier L (2017) Forward selection in a maritime pine polycross progeny trial using pedigree reconstruction.Annals of Forest Science74:21.

Vystavna Y, Frkova Z, Marchand L, Vergeles Y, Stolberg F (2017) Removal efficiency of pharmaceuticals in a full scale constructed wetland in East Ukraine. Ecological Engineering 108:50-58.

Wan Q, Zheng Z, Huang K, Guichoux E & Petit RJ (2017) Genetic divergence within the monotypic tree genus Platycarya (Juglandaceae) and its implications for species’ past dynamics in subtropical China. Tree Genetics & Genomes13, 73.

Yang M, Défossez P, Danjon F, Dupont S, Fourcaud T (2017) Which root architectural elements contribute the best to anchorage of Pinus species? Insights from in silico experiments. Plant and Soil 411: 275.

Yousefpour R, Temperli C, Jacobsen JB, Thorsen BJ, Meilby H, Lexer M, Lindner M, Bugmann H, Borges J, Palma J, ..., Delzon S, Kremer A,..., Hanewinkel M (2017) A framework for modeling adaptive forest management and decision making under climate change. Ecology and Society22.